ERR1356914_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1356914_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1616774
Sequences flagged as poor quality	0
Sequence length	75
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCCTAGTACTGTGCGCCAATTAGGTCGTCATTGCGCCAGCTCGTCAGCGCTGGTCGTCTACCAGCTCGATAATTG	4057	0.25093179380667924	No Hit
GTACAAGCAGTGGTATCAACGCAGAGTACAAGCAGTGGTATCAACGCAGAGTACAAGCAGTGGTATCAACGCAGA	3741	0.23138669968715478	No Hit
GAGTACAAGCAGTGGTATCAACGCAGAGTACAAGCAGTGGTATCAACGCAGAGTACAAGCAGTGGTATCAACGCA	2858	0.17677176896709126	No Hit
GTACTAGGCATCGTCATCCAATGCGACGAGTCCTACACTATCTTGGATATGATATGGCGCACTACACATGCTAGC	2435	0.15060855753494304	No Hit
GTATACGGGCGTCGGCATCCAGACCGTCGGCTGATCGTGGTTTTACTAGGCTAGACTAGCGTACGAGCACTATGG	2430	0.15029929971659614	No Hit
GTATAAGGTGATCGCAGGTTGTGCAATCATTGCTCAAAAGGGTGTACACCGCCCTTAGACGTCTTGGTATACGGA	2160	0.13359937752586323	No Hit
GCTTGTACTCTGCGTTGATACCACTGCTTGTACTCTGCGTTGATACCACTGCTTGTACTCTGCGTTGATACCACT	2044	0.126424596140215	No Hit
CCTATTAGGAGCCGATCGTGCTTGTGCGCCGGCAAAACTTTTCAGGCGAATTTCCGCCCCTGGCGCTCTAGGCTA	1954	0.12085795540997073	No Hit
GTGTAGGACTCGTCGCATTGGATGACGATGCCTAGTACTGTGCGCCAATTAGGTCGTCATTGCGCCAGCTCGTCA	1931	0.11943536944557497	No Hit
GTCCTACACTATCTTGGATATGATATGGCGCACTACACATGCTAGCCGCTGGGGAGATTAGCTCGAGTTGCCCCT	1818	0.11244614275093488	No Hit
GTCTAACGCCTACCAGTACTGATTGCCGAGCAAATCTGTGAATGGCGACTATGCGCCTAGTCAACCAGATGTGTG	1799	0.11127096304121664	No Hit
GTATAAAATCAGGCAGTTTTTGATCACGTTTATTGTAAGCCGTCAGCATCGGGATATCATCTGCTTCAAGCTCCT	1687	0.10434358791024595	No Hit
ATCTAATTCACCTCCTATTAGGAGCCGATCGTGCTTGTGCGCCGGCAAAACTTTTCAGGCGAATTTCCGCCCCTG	1640	0.10143656441778505	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATCGTCA	735	0.0	36.140507	10
CAATGCG	765	0.0	35.625134	19
GAGTCCT	770	0.0	34.946857	28
TACCCCG	100	3.783498E-10	34.52554	5
CGACGAG	825	0.0	32.61505	24
TGGTCGT	1040	0.0	32.516556	51
GGGTAAA	175	0.0	31.56816	1
TCAAGAC	180	0.0	30.691267	3
ATCGGCA	45	0.0046303165	30.657082	35
ACCCTTG	260	0.0	30.5163	7
CGACTGA	80	2.7559709E-6	30.196753	6
GTCATCC	905	0.0	29.350773	13
GTCAGCG	1165	0.0	29.314783	43
AGTCATA	120	2.6902853E-9	28.74724	15
GTCTACC	1200	0.0	27.893456	56
GCGCTGG	1255	0.0	27.762274	47
GCTCGTC	1230	0.0	27.757895	39
CGAACGT	50	0.0077312766	27.603333	66
CAGGTCC	50	0.0077476404	27.591373	58
GCTCGAT	1180	0.0	27.18975	64