ERR1356904_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1356904_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1505509
Sequences flagged as poor quality	0
Sequence length	75
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTATCAACGCAGAGTAA	6103	0.40537784895341045	No Hit
GCTTACTCTGCGTTGATACCACTGCTTACTCTGCGTTGATACCACTGCTTACTCTGCGTTGATACCACTGCTTAC	3459	0.2297561821284363	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAG	3409	0.22643504622024843	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG	2907	0.1930908417020423	No Hit
GCGTTGATACCACTGCTTACTCTGCGTTGATACCACTGCTTACTCTGCGTTGATACCACTGCTTACTCTGCGTTG	2826	0.18771060153077798	No Hit
GTACATGGTAAGCAGTGGTATCAACGCAGAGTACATGGTAAGCAGTGGTATCAACGCAGAGTACATGGTAAGCAG	2593	0.1722341081986225	No Hit
GCCTAGTACTGTGCGCCAATTAGGTCGTCATTGCGCCAGCTCGTCAGCGCTGGTCGTCTACCAGCTCGATAATTG	2401	0.15948094631118112	No Hit
CTGCTTACTCTGCGTTGATACCACTGCTTACTCTGCGTTGATACCACTGCTTACTCTGCGTTGATACCACTGCTT	2351	0.15615981040299326	No Hit
ACCATGTACTCTGCGTTGATACCACTGCTTACCATGTACTCTGCGTTGATACCACTGCTTACCATGTACTCTGCG	2153	0.14300811220656934	No Hit
GTATCAACGCAGAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTATCA	1828	0.12142072880334824	No Hit
GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC	1640	0.10893325778856189	No Hit
GCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTG	1544	0.10255667684484118	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTGGTCG	155	0.0	40.06226	40
TCGCCGT	155	0.0	37.837833	44
CTCGGTG	175	0.0	37.445072	36
ATCGTCA	470	0.0	36.698837	10
CCGTATC	180	0.0	36.412197	47
TCTCGGT	190	0.0	36.30409	35
CAATGCG	495	0.0	36.24159	19
GATCTCG	230	0.0	35.99917	33
TGGTCGC	195	0.0	33.61349	41
GGTCGCC	200	0.0	32.77424	42
GGTCCTA	95	8.807547E-9	32.681282	8
GTCATCC	555	0.0	31.698809	13
TAAGCGT	55	3.2509645E-4	31.374384	6
ACGTTAG	55	3.2579442E-4	31.362911	42
GAGTCCT	530	0.0	31.24456	28
AGATCTC	255	0.0	31.116926	32
GTATTAT	180	0.0	30.6884	1
ATTGTGG	45	0.004615398	30.677174	6
GTCGCCG	205	0.0	30.291983	43
TGGTCGT	690	0.0	29.5052	51