ERR1356865_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1356865_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1578087
Sequences flagged as poor quality	0
Sequence length	75
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCCTAGTACTGTGCGCCAATTAGGTCGTCATTGCGCCAGCTCGTCAGCGCTGGTCGTCTACCAGCTCGATAATTG	4036	0.2557526929757358	No Hit
CCTATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTCATCCCTACTCATAACCCCAGCACTT	2681	0.1698892393131684	No Hit
ATACTATATAGGTGGCTATCTATCCCTACCAAGGCTTATATTGAAGTATAAACCAATGAGAGAGCCTCACTTAGT	2668	0.16906545710090762	No Hit
GTACTAGGCATCGTCATCCAATGCGACGAGTCCTACACTATCTTGGATATGATATGGCGCACTACACATGCTAGC	2403	0.15227297354328373	No Hit
GTATACGGGCGTCGGCATCCAGACCGTCGGCTGATCGTGGTTTTACTAGGCTAGACTAGCGTACGAGCACTATGG	2073	0.13136157892435588	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1762	0.11165417369257842	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATCGTCA	720	0.0	35.93227	10
CGACGAG	735	0.0	35.198956	24
CAATGCG	710	0.0	34.981926	19
TGGTCGT	980	0.0	34.85912	51
GTACACG	50	1.8415743E-4	34.563972	1
GTACGTG	40	0.0025984817	34.494976	35
TTCGGTC	165	0.0	33.461338	49
CGGTCCA	165	0.0	33.461338	51
GTCAGCG	1065	0.0	33.36134	43
GAGTCCT	780	0.0	33.168247	28
GTCTACC	1060	0.0	32.22926	56
GTCGTCT	1090	0.0	31.963238	53
TCAGCGC	1165	0.0	31.089893	44
GCTCGAT	1035	0.0	30.67095	64
TGAACCG	90	1.9957588E-7	30.667063	5
CGGCGAT	45	0.004626501	30.662205	32
TCGCTGG	135	9.094947E-12	30.662205	12
GCTCGTC	1195	0.0	30.598057	39
GCGCTGG	1145	0.0	30.438494	47
CCGTGTT	80	2.765646E-6	30.183104	9