ERR1356790_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1356790_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1613075
Sequences flagged as poor quality	0
Sequence length	75
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4288	0.2658276893510841	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3029	0.18777800164282504	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2558	0.15857911132464392	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	2439	0.1512018969979697	No Hit
GATATAGGCTTACTAGGAGGGTGAATACGTAGGCTTGAATTAATGCTACTGCAAATTCTAGAATTGTGAGTAGAA	1812	0.11233203663809804	No Hit
CTATTAACCCTTGGCCTACTCACCAATATCCTCACAATATATCAATGATGACGAGACGTAATTCGTGAAGGAACC	1728	0.1071245912310339	No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1694	0.10501681570912699	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTAGCGC	20	0.0073596328	51.74988	22
AGTCTAA	20	0.0073650493	51.740257	40
CAATGCG	230	0.0	44.997105	19
ATCGTCA	240	0.0	44.559635	10
CGACGAG	255	0.0	41.941086	24
GAGTCCT	270	0.0	39.608566	28
CGGTCCA	60	1.34176225E-5	34.504204	51
CGAGTAA	40	0.0025974622	34.497784	11
GAGGCGA	40	0.0025974622	34.497784	27
ATCGGCG	40	0.0025990428	34.493504	41
CGTTAAC	125	3.6379788E-12	33.146656	1
TCCGATC	55	3.255279E-4	31.367458	52
GTCAGCG	245	0.0	30.97568	43
TGGTCGT	270	0.0	30.670404	51
GTGCGTC	90	1.9971594E-7	30.664694	13
GCACCGC	45	0.004627499	30.66089	37
TAGGCAT	635	0.0	30.444016	5
CATATAG	435	0.0	28.574703	3
GTCATCC	385	0.0	27.777435	13
ATTCCGA	50	0.0077312277	27.603365	50