ERR1356790_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1356790_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1613075
Sequences flagged as poor quality	0
Sequence length	75
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4208	0.2608682175348325	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3076	0.19069169133487282	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2667	0.16533639167428668	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	2314	0.14345272228507663	No Hit
CTATTAACCCTTGGCCTACTCACCAATATCCTCACAATATATCAATGATGACGAGACGTAATTCGTGAAGGAACC	1827	0.11326193760364521	No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1725	0.10693861103792447	No Hit
GATATAGGCTTACTAGGAGGGTGAATACGTAGGCTTGAATTAATGCTACTGCAAATTCTAGAATTGTGAGTAGAA	1701	0.105450769493049	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GACTTTG	20	0.007364236	51.741703	25
TCTAGAC	145	0.0	40.44555	3
ACTGACG	70	2.1931555E-8	39.42225	23
CCTAAGC	35	0.0013490426	39.42225	28
CGTCAAC	35	0.0013490426	39.42225	42
CGCTTTA	45	1.0026918E-4	38.327187	26
CGGTCCA	55	7.3855153E-6	37.64433	51
ATCGTCA	265	0.0	35.146393	10
CGACGAG	275	0.0	35.121635	24
AACCGTG	50	1.8631667E-4	34.495537	7
CCGTGTT	50	1.8631667E-4	34.495537	9
CACAGTG	40	0.0025982917	34.495537	7
GAACCGT	60	1.3440731E-5	34.495537	6
TCGCTGG	80	7.107337E-8	34.49447	12
ACATACG	90	5.2004907E-9	34.49447	17
TGGTCGT	365	0.0	34.0346	51
GCTCGTC	400	0.0	33.632107	39
GTCAGCG	360	0.0	33.53629	43
CAATGCG	295	0.0	32.740513	19
ATTCGCT	85	1.2103192E-7	32.46639	10