Basic Statistics
Measure | Value |
---|---|
Filename | ERR1391391.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 704779 |
Sequences flagged as poor quality | 0 |
Sequence length | 51 |
%GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AATCGGT | 25 | 0.002111912 | 35.981377 | 42 |
CTCGTAT | 40 | 1.5652464E-5 | 33.732544 | 42 |
TCGTATG | 40 | 1.5652464E-5 | 33.732544 | 43 |
CGTATGC | 45 | 3.501288E-5 | 29.984484 | 44 |
TCTCGTA | 45 | 3.501288E-5 | 29.984484 | 41 |
CGCGCCC | 40 | 6.187568E-4 | 28.106464 | 11 |
AGACCGG | 50 | 7.186712E-5 | 26.982204 | 28 |
GCTGCGG | 45 | 0.0011970815 | 25.10285 | 1 |
ACCGCGC | 45 | 0.0012308044 | 24.983526 | 9 |
CCGGCAC | 55 | 1.3736013E-4 | 24.529278 | 31 |
GACCGGC | 55 | 1.3736013E-4 | 24.529278 | 29 |
CGGCACA | 55 | 1.3736013E-4 | 24.529278 | 32 |
ACCGGCA | 65 | 1.5304582E-5 | 24.2148 | 30 |
GATCGGA | 60 | 2.4760328E-4 | 22.486767 | 18 |
ATCTCGT | 65 | 4.250804E-4 | 20.758488 | 40 |
AGATCGG | 65 | 4.2548773E-4 | 20.755543 | 17 |
CCGCGCC | 55 | 0.0039501027 | 20.441065 | 10 |
CACCGCG | 55 | 0.0039501027 | 20.441065 | 8 |
GTATGCC | 85 | 0.0025727078 | 15.874139 | 45 |
ATCGGAA | 85 | 0.0025739262 | 15.873013 | 19 |