Basic Statistics
Measure | Value |
---|---|
Filename | ERR1391385.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 457478 |
Sequences flagged as poor quality | 0 |
Sequence length | 51 |
%GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
ACCGCGC | 30 | 1.1420935E-4 | 37.481873 | 9 |
CACCGCG | 30 | 1.1420935E-4 | 37.481873 | 8 |
CCACCGC | 65 | 4.883186E-7 | 27.678923 | 7 |
AGATCGG | 60 | 8.208221E-6 | 26.23731 | 17 |
ATCGGAA | 65 | 1.5255604E-5 | 24.221704 | 19 |
GCCACCG | 75 | 1.6499635E-6 | 24.072598 | 6 |
GATCGGA | 75 | 4.6081237E-5 | 20.992144 | 18 |
GAGATCG | 85 | 1.2068948E-4 | 18.520456 | 16 |
CGCCCGG | 100 | 2.0507725E-5 | 17.9913 | 13 |
GCGGTTC | 90 | 1.8694796E-4 | 17.49154 | 28 |
CCGAGAC | 90 | 1.8694796E-4 | 17.49154 | 45 |
CGAGATC | 90 | 1.8694796E-4 | 17.49154 | 15 |
TTGCAAC | 80 | 0.0016745224 | 16.926044 | 3 |
CCGGCTA | 80 | 0.0017142562 | 16.866844 | 16 |
CACCACG | 175 | 2.6921043E-9 | 16.706207 | 8 |
TCGGAAG | 95 | 2.8227468E-4 | 16.572744 | 20 |
AGCGGTT | 95 | 2.8251018E-4 | 16.570934 | 27 |
CCGAGAT | 95 | 2.8251018E-4 | 16.570934 | 14 |
GCCCGGC | 150 | 1.4250509E-7 | 16.492023 | 14 |
CGGAAGA | 100 | 4.1720626E-4 | 15.744108 | 21 |