Basic Statistics
Measure | Value |
---|---|
Filename | ERR1391328.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 702541 |
Sequences flagged as poor quality | 0 |
Sequence length | 51 |
%GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GACCGGT | 80 | 3.6379788E-12 | 33.72982 | 29 |
ACCGGTT | 85 | 5.456968E-12 | 31.745712 | 30 |
TCGTATG | 85 | 5.456968E-12 | 31.743452 | 43 |
CTCGTAT | 90 | 1.2732926E-11 | 29.97993 | 42 |
TATCTCG | 90 | 1.2732926E-11 | 29.97993 | 39 |
GGCCGAC | 30 | 0.0051627792 | 29.979929 | 17 |
TCTCGTA | 95 | 2.3646862E-11 | 28.402039 | 41 |
ATCGGAA | 80 | 3.414243E-9 | 28.106184 | 19 |
CGTATGC | 100 | 4.5474735E-11 | 26.983856 | 44 |
TCGGAAG | 85 | 6.519258E-9 | 26.452877 | 20 |
ATCTCGT | 105 | 8.54925E-11 | 25.697083 | 40 |
CCGGTTC | 105 | 8.54925E-11 | 25.697083 | 31 |
GAGACCG | 115 | 9.094947E-12 | 25.419577 | 27 |
AGATCGG | 90 | 1.1978045E-8 | 24.983274 | 17 |
GATCGGA | 95 | 2.12749E-8 | 23.668365 | 18 |
AGACCGG | 130 | 5.0931703E-11 | 22.486547 | 28 |
GCGGTTC | 135 | 8.367351E-11 | 21.65217 | 8 |
ACGCCCG | 55 | 0.00395032 | 20.44086 | 12 |
TCTTCGT | 90 | 7.946095E-6 | 20.08526 | 6 |
GAGCGGT | 135 | 1.8590072E-9 | 20.085258 | 6 |