Basic Statistics
Measure | Value |
---|---|
Filename | ERR1391320.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 790660 |
Sequences flagged as poor quality | 0 |
Sequence length | 51 |
%GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CGTATGC | 80 | 0.0 | 36.53809 | 44 |
TCTCGTA | 80 | 0.0 | 36.535778 | 41 |
CTCGTAT | 90 | 0.0 | 32.47625 | 42 |
TCGTATG | 90 | 0.0 | 32.47625 | 43 |
CCGCTCA | 95 | 0.0 | 30.766973 | 31 |
AGACCGC | 105 | 0.0 | 29.978075 | 28 |
CGCTCAA | 105 | 3.6379788E-12 | 27.836784 | 32 |
TATCTCG | 105 | 3.6379788E-12 | 27.836784 | 39 |
ATCTCGT | 110 | 5.456968E-12 | 26.571476 | 40 |
GACCGCT | 110 | 5.456968E-12 | 26.571476 | 29 |
GATCGGA | 125 | 1.8189894E-12 | 25.183174 | 18 |
ACCGCTC | 120 | 1.8189894E-11 | 24.357187 | 30 |
ATCGGAA | 130 | 1.8189894E-12 | 24.214594 | 19 |
GAGACCG | 125 | 2.910383E-11 | 23.3829 | 27 |
GTATGCC | 135 | 3.6379788E-12 | 23.317755 | 45 |
TCGGAAG | 140 | 5.456968E-12 | 22.484978 | 20 |
AGATCGG | 145 | 9.094947E-12 | 21.70689 | 17 |
CGCCCGC | 65 | 4.1001636E-4 | 20.870203 | 1 |
CTTCGTA | 105 | 1.4554334E-6 | 19.270401 | 7 |
ACTAGAC | 385 | 0.0 | 17.520761 | 19 |