ERR1391264.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1391264.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	458968
Sequences flagged as poor quality	0
Sequence length	51
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TCCAGGGATTTATAAGCCGATGACGTCATAACATCCCTGACCCTTTAAATA	2979	0.6490648585522303	No Hit
TCGTTGGAATTCCTCGGGGAATTCGGTATTCCCAGGCGGTCTCCCATCCAA	2285	0.49785605968172075	No Hit
AAGAGCGGTTCAGCAGGAATGCCGAGACCGTGAGACATCTCGTATGCCGTC	876	0.19086297955413012	Illumina Paired End PCR Primer 2 (96% over 30bp)
CGGAAGAGCGGTTCAGCAGGAATGCCGAGACCGTGAGACATCTCGTATGCC	758	0.1651531261438706	Illumina Paired End PCR Primer 2 (96% over 33bp)
AAGAGCGGTTCAGCAGGAATGCCGAGATCGGAAGAGCGGTTCAGCAGGAAT	498	0.1085042965958411	Illumina Paired End PCR Primer 2 (96% over 30bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGGTCT	265	42.450256	36
AATTCGG	265	42.450256	20
AGGCGGT	260	42.40128	34
GGCGGTC	260	42.40128	35
CGATGAC	330	42.27017	18
TAAGCCG	330	42.265564	13
GAATTCG	270	41.664143	19
TGACGTC	335	41.63927	21
ATGACGT	340	41.026928	20
GCCGATG	340	41.02246	16
CGGTATT	275	40.91107	24
TCGGTAT	275	40.91107	23
TCGGGGA	270	40.826412	14
CGTCATA	345	40.43674	24
GATGACG	345	40.432335	19
CCGATGA	345	40.427933	17
CGGTCTC	280	40.176136	37
TTCCTCG	230	40.123756	10
GACGTCA	350	39.85473	22
AAGCCGA	350	39.850388	14