ERR1391263.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1391263.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	592866
Sequences flagged as poor quality	0
Sequence length	51
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TCCAGGGATTTATAAGCCGATGACGTCATAACATCCCTGACCCTTTAAATA	4496	0.7583501162151313	No Hit
TCGTTGGAATTCCTCGGGGAATTCGGTATTCCCAGGCGGTCTCCCATCCAA	2895	0.4883059578387022	No Hit
AAGAGCGGTTCAGCAGGAATGCCGAGACCGGCAGATATCTCGTATGCCGTC	854	0.1440460407579453	Illumina Paired End PCR Primer 2 (96% over 30bp)
TCAGTTTAAAGATTCGGGGAATTCGGTATTCCCAGGCGGTCTCCCATCCAA	605	0.10204666821845071	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AGCCGAT	505	43.657143	15
TAAGCCG	515	43.24627	13
GCCGATG	510	43.229137	16
CCGATGA	525	42.85104	17
AAGCCGA	530	42.44678	14
GACGTCA	525	42.42253	22
CGATGAC	525	42.42253	18
ACGTCAT	535	41.629585	23
CGTCATA	535	41.629585	24
TGACGTC	535	41.209084	21
ATGACGT	555	40.534763	20
GATGACG	550	40.494232	19
CCTCGGG	360	39.369392	12
GCGGTCT	435	39.304745	36
TCGGTAT	430	39.238598	23
ATGCCGT	110	38.8581	44
CTCGGGG	365	38.830086	13
GGCGGTC	435	38.78758	35
CGGTCTC	445	38.42149	37
CGGGGAA	440	38.34681	15