ERR1391262.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1391262.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	580473
Sequences flagged as poor quality	0
Sequence length	51
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TCCAGGGATTTATAAGCCGATGACGTCATAACATCCCTGACCCTTTAAATA	4244	0.7311278905306534	No Hit
TCGTTGGAATTCCTCGGGGAATTCGGTATTCCCAGGCGGTCTCCCATCCAA	2896	0.49890348043750526	No Hit
AAGAGCGGTTCAGCAGGAATGCCGAGACCGTAGCAGATCTCGTATGCCGTC	1060	0.18260969933140733	Illumina Paired End PCR Primer 2 (96% over 30bp)
CGGAAGAGCGGTTCAGCAGGAATGCCGAGACCGTAGCAGATCTCGTATGCC	1045	0.18002559981256666	Illumina Paired End PCR Primer 2 (96% over 33bp)
AAGAGCGGTTCAGCAGGAATGCCGAGATCGGAAGAGCGGTTCAGCAGGAAT	629	0.10835990649005207	Illumina Paired End PCR Primer 2 (96% over 30bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGACGTC	450	43.991493	21
TAAGCCG	440	43.96877	13
GAATTCG	365	43.75866	19
GACGTCA	450	43.491592	22
CGGTATT	365	43.149773	24
ATGACGT	460	43.03516	20
GATGACG	455	43.01366	19
AGCCGAT	450	42.991688	15
TCGGGGA	380	42.623337	14
GGCGGTC	370	42.570343	35
ATTCGGT	370	42.559338	21
AATTCGG	370	42.559338	20
AAGCCGA	455	42.51925	14
CAGGCGG	375	42.002735	33
TCGGTAT	375	41.99912	23
CGATGAC	475	41.67615	18
CGTCATA	470	41.64806	24
CGGTCTC	385	41.49621	37
AGGCGGT	380	41.45007	34
GCCGATG	470	41.162254	16