ERR1391257.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1391257.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	440082
Sequences flagged as poor quality	0
Sequence length	51
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TCCAGGGATTTATAAGCCGATGACGTCATAACATCCCTGACCCTTTAAATA	4646	1.0557123445176126	No Hit
TCGTTGGAATTCCTCGGGGAATTCGGTATTCCCAGGCGGTCTCCCATCCAA	3288	0.7471334887589132	No Hit
AAGAGCGGTTCAGCAGGAATGCCGAGACCGTGTCTAATCTCGTATGCCGTC	939	0.21336932662549252	Illumina Paired End PCR Primer 2 (96% over 30bp)
CGGAAGAGCGGTTCAGCAGGAATGCCGAGACCGTGTCTAATCTCGTATGCC	794	0.18042092155552827	Illumina Paired End PCR Primer 2 (96% over 33bp)
TCAGTTTAAAGATTCGGGGAATTCGGTATTCCCAGGCGGTCTCCCATCCAA	645	0.14656359496639262	No Hit
AAGAGCGGTTCAGCAGGAATGCCGAGATCGGAAGAGCGGTTCAGCAGGAAT	604	0.1372471493948855	Illumina Paired End PCR Primer 2 (96% over 30bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCCGATG	440	44.481445	16
AGCCGAT	445	43.981655	15
CCGATGA	445	43.981655	17
TGACGTC	450	43.49297	21
TAAGCCG	450	43.49297	13
ACGTCAT	455	43.015022	23
CGATGAC	455	43.015022	18
GACGTCA	460	42.547474	22
AAGCCGA	460	42.547474	14
TATGCCG	80	42.180683	43
ATGACGT	465	42.089973	20
CGTCATA	465	42.089973	24
AGATCGG	125	41.39331	25
GATGACG	475	41.203865	19
CGGTATT	465	41.122387	24
GACCCTT	485	40.822784	39
GCGGTCT	465	40.64321	36
GGCGGTC	470	40.210835	35
TTCGGTA	470	40.20627	22
TCCTCGG	365	40.089348	11