Basic Statistics
Measure | Value |
---|---|
Filename | ERR1391232.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 1020762 |
Sequences flagged as poor quality | 0 |
Sequence length | 51 |
%GC | 42 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GACCGTT | 25 | 0.0021125793 | 35.980602 | 29 |
CGTATGC | 60 | 0.006530296 | 18.739897 | 44 |
CGAATCT | 60 | 0.006532143 | 18.73898 | 37 |
GAAAGCG | 90 | 0.003665078 | 15.053862 | 4 |
ACCACGC | 235 | 5.9117156E-10 | 14.35326 | 9 |
TCGTTGG | 205 | 2.0760126E-8 | 14.319527 | 4 |
TGCCCGG | 110 | 8.625481E-4 | 14.309765 | 13 |
CGTTGGA | 210 | 2.8498107E-8 | 13.978586 | 5 |
CGGGATT | 130 | 1.9354251E-4 | 13.838015 | 14 |
CGGGAAT | 115 | 0.0012060689 | 13.688944 | 21 |
GAGCGGT | 115 | 0.0012069612 | 13.687602 | 26 |
GAAACGG | 215 | 4.0994564E-8 | 13.596655 | 10 |
CCTTCGT | 190 | 1.9782765E-6 | 13.073734 | 1 |
TTCGTTG | 230 | 9.3803465E-8 | 12.763056 | 3 |
AAACGGG | 240 | 1.7247112E-7 | 12.180336 | 11 |
AACGGGA | 225 | 1.0460008E-6 | 11.992946 | 12 |
CACCACG | 285 | 1.0497388E-8 | 11.835725 | 8 |
GGAAACG | 230 | 1.3636582E-6 | 11.73223 | 9 |
CCACGCC | 295 | 1.749504E-8 | 11.433953 | 10 |
CCAACGA | 220 | 1.0176645E-5 | 11.290396 | 6 |