Basic Statistics
Measure | Value |
---|---|
Filename | ERR1391211.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 798545 |
Sequences flagged as poor quality | 0 |
Sequence length | 51 |
%GC | 42 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CCGATGG | 55 | 2.761226E-9 | 36.798508 | 31 |
ACCGATG | 50 | 4.8987204E-8 | 35.980766 | 30 |
GACCGAT | 55 | 1.1322845E-7 | 32.709785 | 29 |
CGATGGT | 65 | 1.4097168E-8 | 31.1372 | 32 |
AGACCGA | 70 | 9.34504E-7 | 25.700544 | 28 |
CGTATGC | 80 | 2.9818257E-6 | 22.492203 | 44 |
TCGTATG | 80 | 2.9818257E-6 | 22.492203 | 43 |
GAGACCG | 85 | 5.0523686E-6 | 21.165155 | 27 |
TCTCGTA | 90 | 8.270803E-6 | 19.993069 | 41 |
GATCGGA | 80 | 7.590421E-5 | 19.676981 | 26 |
ATCGGAA | 80 | 7.590421E-5 | 19.676981 | 27 |
CTCGTAT | 95 | 1.31894485E-5 | 18.940802 | 42 |
CCGAGAC | 95 | 1.3210834E-5 | 18.937244 | 25 |
ATGCCCG | 60 | 0.00652891 | 18.739983 | 12 |
AGATCGG | 85 | 1.2087991E-4 | 18.51951 | 25 |
ACCACGC | 110 | 2.2657714E-6 | 18.399254 | 9 |
AGCGAGA | 75 | 0.0011133392 | 17.991508 | 37 |
TCGGAAG | 90 | 1.8724136E-4 | 17.49065 | 28 |
CGCCACC | 145 | 9.307041E-8 | 17.124182 | 5 |
CACGCCC | 95 | 2.829513E-4 | 16.57009 | 11 |