Basic Statistics
Measure | Value |
---|---|
Filename | ERR1391210.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 974491 |
Sequences flagged as poor quality | 0 |
Sequence length | 51 |
%GC | 42 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TCCCCGA | 40 | 6.1912666E-4 | 28.104923 | 17 |
TCCTTCG | 55 | 0.003951251 | 20.440994 | 42 |
AACGGGT | 55 | 0.0039524254 | 20.439945 | 12 |
CCTTCGT | 150 | 3.237801E-10 | 19.589613 | 1 |
CTTCGCA | 60 | 0.0065366887 | 18.736616 | 36 |
ACGGGTT | 60 | 0.0065366887 | 18.736616 | 13 |
ATCTTCG | 140 | 1.1962566E-6 | 16.144453 | 5 |
TCGTTGG | 185 | 5.287802E-9 | 15.88265 | 4 |
ATGCCCG | 100 | 4.1889213E-4 | 15.738757 | 12 |
CGTTGGA | 195 | 1.0604708E-8 | 15.068155 | 5 |
CGGAAGC | 90 | 0.0037712452 | 14.989293 | 26 |
CGTATAA | 135 | 1.5917727E-5 | 14.989293 | 10 |
CCGGCTA | 210 | 1.8681021E-9 | 14.989293 | 16 |
TCGTATA | 120 | 9.8092394E-5 | 14.989293 | 9 |
CGCCACT | 120 | 9.8092394E-5 | 14.989293 | 9 |
CTTCGTT | 200 | 1.4808393E-8 | 14.691451 | 2 |
CTTCGTA | 140 | 2.2443492E-5 | 14.453961 | 7 |
TCTTCGT | 160 | 4.7938465E-6 | 14.126395 | 6 |
TTCGTTG | 210 | 2.8139766E-8 | 13.9918585 | 3 |
GACTCCG | 130 | 1.8529793E-4 | 13.909067 | 3 |