Basic Statistics
Measure | Value |
---|---|
Filename | ERR1391207.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 815439 |
Sequences flagged as poor quality | 0 |
Sequence length | 51 |
%GC | 42 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GACCGCC | 45 | 3.5030476E-5 | 29.983116 | 29 |
AGACCGC | 45 | 3.5030476E-5 | 29.983116 | 28 |
CTCGTAT | 40 | 6.184923E-4 | 28.10917 | 42 |
TCTCGTA | 40 | 6.184923E-4 | 28.10917 | 41 |
TATCTCG | 45 | 0.0012307197 | 24.984396 | 39 |
TCGTATG | 55 | 1.3729621E-4 | 24.53164 | 43 |
ATCGGAA | 75 | 1.7049679E-6 | 23.986492 | 19 |
CGTATGC | 60 | 2.474017E-4 | 22.490095 | 44 |
ACCGCCT | 60 | 2.4760718E-4 | 22.487337 | 30 |
GATCGGA | 70 | 2.713524E-5 | 22.487335 | 18 |
AGATCGG | 70 | 2.7148099E-5 | 22.485958 | 17 |
ATCTCGT | 60 | 0.0065300986 | 18.739449 | 40 |
CCGAGAC | 90 | 1.8711269E-4 | 17.492296 | 45 |
ACGCCCG | 80 | 0.0017174277 | 16.864468 | 12 |
CGGCTAA | 100 | 4.1850173E-4 | 15.7401705 | 17 |
AACCCCG | 115 | 6.811315E-5 | 15.643364 | 31 |
CGCCCGC | 135 | 1.5246125E-5 | 15.0571165 | 1 |
CGCCTCT | 90 | 0.003766755 | 14.991558 | 32 |
GAGACCG | 90 | 0.003766755 | 14.991558 | 27 |
CCGGCTA | 105 | 6.062843E-4 | 14.990639 | 16 |