Basic Statistics
Measure | Value |
---|---|
Filename | ERR1391193.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 1176893 |
Sequences flagged as poor quality | 0 |
Sequence length | 51 |
%GC | 39 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
TCCAGGGATTTATAAGCCGATGACGTCATAACATCCCTGACCCTTTAAATA | 2891 | 0.24564680051627463 | No Hit |
TCGTTGGAATTCCTCGGGGAATTCGGTATTCCCAGGCGGTCTCCCATCCAA | 2116 | 0.17979544444567178 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GCCGATG | 350 | 0.0 | 41.784885 | 16 |
GACGTCA | 350 | 0.0 | 41.14204 | 22 |
TAAGCCG | 350 | 0.0 | 41.14204 | 13 |
TGACGTC | 355 | 0.0 | 40.562576 | 21 |
AGCCGAT | 365 | 0.0 | 39.45127 | 15 |
CCGATGA | 365 | 0.0 | 39.45127 | 17 |
ATGACGT | 370 | 0.0 | 38.918148 | 20 |
GATGACG | 370 | 0.0 | 38.918148 | 19 |
AAGCCGA | 380 | 0.0 | 37.893986 | 14 |
CGTCATA | 380 | 0.0 | 37.893986 | 24 |
CGGTATT | 295 | 0.0 | 37.372143 | 24 |
TCGGTAT | 295 | 0.0 | 37.372143 | 23 |
GGCGGTC | 300 | 0.0 | 36.74927 | 35 |
ACGTCAT | 400 | 0.0 | 36.561775 | 23 |
AGATCGG | 105 | 0.0 | 36.42785 | 25 |
ATTCGGT | 305 | 0.0 | 36.146824 | 21 |
TCCTCGG | 270 | 0.0 | 35.83262 | 11 |
TTCCTCG | 270 | 0.0 | 35.83262 | 10 |
GCGGTCT | 310 | 0.0 | 35.563812 | 36 |
CGATGAC | 410 | 0.0 | 35.121254 | 18 |