ERR1378579.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1378579.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	357854
Sequences flagged as poor quality	0
Sequence length	51
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGGAAGAGCGGTTCAGCAGGAATGCCGAGACCGAGCGTAATCTCGTATGCC	2097	0.5859931703991013	Illumina Paired End PCR Primer 2 (97% over 36bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CCGAGCG	280	44.196014	31
ACCGAGC	285	43.42065	30
GAGCGTA	285	43.42065	33
CGAGCGT	285	43.42065	32
AGCGTAA	280	43.392452	34
GCGTAAT	280	43.392452	35
GAGACCG	290	42.672012	27
AGACCGA	290	42.672012	28
ATCTCGT	285	42.631184	40
CTCGTAT	285	42.631184	42
AATCTCG	285	42.631184	39
CGTAATC	285	42.631184	36
TCTCGTA	290	41.89616	41
GACCGAG	305	40.573395	29
CGTATGC	305	39.835693	44
GTATGCC	305	39.835693	45
GCGGTTC	320	39.374634	8
CGGTTCA	325	38.76887	9
CCGAGAC	315	38.571068	25
GAGCGGT	325	38.07657	6