ERR1378572.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1378572.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	361778
Sequences flagged as poor quality	0
Sequence length	51
%GC	39

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGGAAGAGCGGTTCAGCAGGAATGCCGAGACCGGATCGAATCTCGTATGCC	1891	0.5226962391300742	Illumina Paired End PCR Primer 2 (96% over 33bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GACCGGA	190	40.26217	29
GGATCGA	190	40.26217	33
CGGATCG	190	40.26217	32
TCTCGTA	190	40.26217	41
CGAATCT	190	40.26217	37
TCGTATG	190	40.26217	43
TCGAATC	190	40.26217	36
ACCGGAT	195	39.229805	30
CTCGTAT	195	39.229805	42
GATCGAA	200	38.249058	34
CGTATGC	205	37.31616	44
CCGGATC	205	37.31616	31
ATCTCGT	210	36.427677	40
GAGACCG	210	36.427677	27
AGACCGG	210	36.427677	28
GTATGCC	215	35.58052	45
AATCTCG	215	35.58052	39
GCGGTTC	245	33.06041	8
AGCGGTT	245	33.06041	7
CGGAAGA	235	32.561394	1