ERR1378570.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1378570.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	367061
Sequences flagged as poor quality	0
Sequence length	51
%GC	39

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGGAAGAGCGGTTCAGCAGGAATGCCGAGACCGCGTAGAATCTCGTATGCC	2033	0.55385889538796	Illumina Paired End PCR Primer 2 (96% over 33bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ACCGCGT	250	42.297825	30
CCGCGTA	250	42.297825	31
CGCGTAG	250	42.297825	32
GCGTAGA	250	42.297825	33
CGTATGC	255	41.468456	44
GACCGCG	250	41.39787	29
CGTAGAA	260	40.670986	34
TCGTATG	260	40.670986	43
GAGACCG	255	40.586147	27
AGACCGC	255	40.586147	28
CTCGTAT	260	39.805645	42
CCGAGAC	260	39.805645	25
ATCTCGT	265	39.054596	40
GAGCGGT	280	38.574696	6
ATGCCGA	290	38.015285	22
GCGGTTC	285	37.89795	8
AGCGGTT	285	37.89795	7
TGCCGAG	285	37.892788	23
TCTCGTA	275	37.634426	41
CGGTTCA	290	37.239464	9