ERR1378537.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1378537.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	297061
Sequences flagged as poor quality	0
Sequence length	51
%GC	39

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGGAAGAGCGGTTCAGCAGGAATGCCGAGACCGTGTATCATCTCGTATGCC	1620	0.5453425390744662	Illumina Paired End PCR Primer 2 (96% over 33bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCGTATG	210	42.857143	43
CGTATGC	215	41.860466	44
CTCGTAT	215	41.860466	42
TCTCGTA	215	41.860466	41
GACCGTG	210	41.785713	29
CCGTGTA	210	41.785713	31
AGACCGT	210	41.785713	28
CCGAGAC	220	39.886364	25
ATCTCGT	240	39.374996	40
CGTGTAT	230	39.130436	32
ACCGTGT	225	39.0	30
AGCGGTT	240	38.437496	7
GCGGTTC	245	37.65306	8
CGGTTCA	245	37.65306	9
GAGCGGT	245	37.65306	6
AGAGCGG	245	37.65306	5
GAGACCG	235	37.340427	27
CGGAAGA	230	37.173916	1
CATCTCG	250	36.9	39
GTGTATC	250	36.000004	33