ERR1378535.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1378535.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	523786
Sequences flagged as poor quality	0
Sequence length	51
%GC	39

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGGAAGAGCGGTTCAGCAGGAATGCCGAGACCGTACTGTATCTCGTATGCC	2687	0.5129957654461937	Illumina Paired End PCR Primer 2 (96% over 33bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TATCTCG	320	43.59375	39
CGTACTG	320	43.59375	32
CCGTACT	325	42.923077	31
CGTATGC	330	42.272728	44
ACCGTAC	330	42.272728	30
GACCGTA	325	42.23077	29
TCTCGTA	335	41.641792	41
GAGACCG	335	40.97015	27
AGACCGT	335	40.97015	28
GCGGTTC	345	40.43478	8
TCGTATG	345	40.43478	43
AGCGGTT	350	39.857143	7
CCGAGAC	345	39.782608	25
GTATGCC	355	39.295776	45
GAGCGGT	355	39.295776	6
ATCTCGT	360	38.75	40
CTCGTAT	360	38.75	42
AAGAGCG	365	38.219177	4
CGGTTCA	365	38.219177	9
CGGAAGA	355	37.394367	1