ERR1378526.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1378526.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	343028
Sequences flagged as poor quality	0
Sequence length	51
%GC	38

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGGAAGAGCGGTTCAGCAGGAATGCCGAGACCGTACACTATCTCGTATGCC	2143	0.6247303427125482	Illumina Paired End PCR Primer 2 (96% over 33bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTATGC	215	42.905586	44
GACCGTA	215	42.905586	29
TCTCGTA	215	42.905586	41
TCGTATG	215	42.905586	43
ACCGTAC	215	42.905586	30
ATCTCGT	220	41.93046	40
CTCGTAT	220	41.93046	42
TATCTCG	220	41.93046	39
GTATGCC	220	41.93046	45
CGTACAC	220	41.93046	32
GAGACCG	225	40.998672	27
AGACCGT	225	40.998672	28
CCGAGAC	235	40.211464	25
CCGTACA	230	40.1074	31
CGAGACC	245	38.57018	26
AATGCCG	245	37.65184	21
ATGCCGA	245	37.65184	22
TGCCGAG	245	37.65184	23
GAGCGGT	250	36.904182	6
GTACACT	250	36.898808	33