ERR1378518.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1378518.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	441679
Sequences flagged as poor quality	0
Sequence length	51
%GC	39

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGGAAGAGCGGTTCAGCAGGAATGCCGAGACCGTAGATAATCTCGTATGCC	2163	0.48972217379590155	Illumina Paired End PCR Primer 2 (96% over 33bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTATGC	270	43.333225	44
TCTCGTA	270	43.333225	41
CCGTAGA	275	42.545345	31
CGTAGAT	275	42.545345	32
GACCGTA	270	42.499893	29
ATCTCGT	280	41.78561	40
ACCGTAG	285	41.05253	30
AGACCGT	280	40.98204	28
CGAGACC	275	40.90899	26
GATAATC	295	40.423626	36
CTCGTAT	290	40.34473	42
AATCTCG	290	40.34473	39
TCGTATG	290	40.34473	43
GCGGTTC	295	39.660915	8
GAGACCG	290	39.56887	27
GAGCGGT	300	38.9999	6
ATGCCGA	295	38.898205	22
AGAGCGG	310	38.467644	5
AGCGGTT	305	38.360558	7
CGGTTCA	310	37.74184	9