Basic Statistics
Measure | Value |
---|---|
Filename | ERR1378426.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 1073548 |
Sequences flagged as poor quality | 0 |
Sequence length | 51 |
%GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CGCAATT | 65 | 1.4037141E-8 | 31.152973 | 32 |
CGGGTCC | 30 | 0.0051478134 | 29.99916 | 23 |
TCTCGTA | 70 | 2.8865543E-8 | 28.927765 | 41 |
CTCGTAT | 65 | 4.874073E-7 | 27.691532 | 42 |
AGACCGC | 65 | 4.874073E-7 | 27.691532 | 28 |
TCGTATG | 70 | 9.308842E-7 | 25.713568 | 43 |
CCGCAAT | 70 | 9.308842E-7 | 25.713568 | 31 |
CGTATGC | 75 | 1.6978847E-6 | 23.99933 | 44 |
AGCGGTT | 75 | 1.6978847E-6 | 23.99933 | 7 |
GCGGTTC | 80 | 2.9751718E-6 | 22.49937 | 8 |
ACCGCAA | 80 | 2.9751718E-6 | 22.49937 | 30 |
GACCGCA | 85 | 5.0329163E-6 | 21.175879 | 29 |
ATCTCGT | 95 | 1.3160166E-5 | 18.946838 | 40 |
GAGACCG | 100 | 2.046923E-5 | 17.999496 | 27 |
AAGAGCG | 115 | 3.4415007E-6 | 17.612305 | 4 |
TGAGCCG | 195 | 3.45608E-11 | 17.307209 | 45 |
CCGAGAC | 105 | 3.11286E-5 | 17.142378 | 25 |
CGGTTCA | 110 | 4.638167E-5 | 16.363178 | 9 |
CTTCGTT | 155 | 2.0608422E-7 | 15.971014 | 2 |
TCGTTGG | 185 | 5.6024874E-9 | 15.814053 | 4 |