Basic Statistics
Measure | Value |
---|---|
Filename | ERR1378392.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 1094073 |
Sequences flagged as poor quality | 0 |
Sequence length | 51 |
%GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TCTCGTA | 65 | 1.5235202E-5 | 24.231064 | 41 |
CGTTAAC | 70 | 2.7035388E-5 | 22.499247 | 32 |
ACGACGC | 50 | 0.0022655837 | 22.498217 | 9 |
GACCGTT | 75 | 4.6035624E-5 | 20.999296 | 29 |
CATTACG | 55 | 0.0039371825 | 20.45386 | 30 |
ACCGTTA | 80 | 7.564521E-5 | 19.68684 | 30 |
GCTCCGC | 70 | 6.9826015E-4 | 19.28595 | 36 |
CGTATGC | 85 | 1.2042609E-4 | 18.529638 | 44 |
CCGTTAA | 90 | 1.8660512E-4 | 17.499414 | 31 |
GAGCGGT | 105 | 3.110655E-5 | 17.14385 | 6 |
ACGCCCG | 105 | 3.114318E-5 | 17.141499 | 12 |
AGAGCGG | 120 | 5.16979E-6 | 16.875978 | 5 |
CTCGTAT | 95 | 2.818938E-4 | 16.57915 | 42 |
GCGGTTC | 95 | 2.8209042E-4 | 16.577633 | 8 |
CGGTTCA | 110 | 4.640333E-5 | 16.36234 | 9 |
CCGGCTA | 195 | 6.493792E-10 | 16.152567 | 16 |
CGGCTAA | 155 | 2.067627E-7 | 15.966477 | 17 |
CGCCCGG | 155 | 2.067627E-7 | 15.966477 | 13 |
GCCCGGC | 305 | 0.0 | 15.490576 | 14 |
AGCGGTT | 105 | 6.038066E-4 | 14.999497 | 7 |