Basic Statistics
Measure | Value |
---|---|
Filename | ERR1378386.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 1359565 |
Sequences flagged as poor quality | 0 |
Sequence length | 51 |
%GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TCGTATG | 80 | 0.0 | 36.561096 | 43 |
CGTTCTA | 90 | 0.0 | 32.498753 | 32 |
AGACCGT | 105 | 3.6379788E-12 | 27.856073 | 28 |
TCTCGTA | 100 | 4.5474735E-11 | 26.998962 | 41 |
CTCGTAT | 105 | 8.54925E-11 | 25.713299 | 42 |
CGTATGC | 115 | 9.094947E-12 | 25.433805 | 44 |
GACCGTT | 115 | 9.094947E-12 | 25.433805 | 29 |
ATCTCGT | 110 | 1.5279511E-10 | 24.545416 | 40 |
CCGTTCT | 130 | 5.0931703E-11 | 22.499136 | 31 |
GCGGTTC | 135 | 8.367351E-11 | 21.665834 | 8 |
AGTCCGT | 55 | 0.0039369394 | 20.454514 | 38 |
ACCGTTC | 145 | 2.1827873E-10 | 20.171638 | 30 |
CCGAGAC | 150 | 3.45608E-10 | 19.499252 | 25 |
AGCGGTT | 175 | 1.382432E-10 | 17.999971 | 7 |
GAGACCG | 165 | 1.2314558E-9 | 17.726593 | 27 |
GAGCGGT | 180 | 2.0736479E-10 | 17.501259 | 6 |
CGGAAGA | 185 | 3.0559022E-10 | 17.03389 | 1 |
ATGCCGA | 175 | 2.6921043E-9 | 16.713644 | 22 |
CGGTTCA | 180 | 3.912646E-9 | 16.249376 | 9 |
AATGCCG | 185 | 5.6243152E-9 | 15.810204 | 21 |