Basic Statistics
Measure | Value |
---|---|
Filename | ERR1378385.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 754342 |
Sequences flagged as poor quality | 0 |
Sequence length | 51 |
%GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CGTATGC | 55 | 6.002665E-11 | 40.9071 | 44 |
GACCGTC | 60 | 6.4283086E-9 | 33.74836 | 29 |
TCTCGTA | 60 | 6.4283086E-9 | 33.74836 | 41 |
AGACCGT | 65 | 1.4028046E-8 | 31.15233 | 28 |
GAGCGGT | 75 | 1.6989361E-9 | 30.004509 | 6 |
ACCGTCC | 60 | 2.4181463E-7 | 29.998543 | 30 |
CGTCCTA | 60 | 2.4181463E-7 | 29.998543 | 32 |
CCGAGAC | 75 | 1.7025741E-9 | 29.99854 | 25 |
CTCGTAT | 70 | 2.8847353E-8 | 28.927166 | 42 |
TCGTATG | 80 | 3.3924152E-9 | 28.123634 | 43 |
CGGTTCA | 90 | 3.947207E-10 | 27.498663 | 9 |
AGAGCGG | 85 | 6.4628694E-9 | 26.474566 | 5 |
AGCGGTT | 85 | 6.4683263E-9 | 26.472809 | 7 |
GCGGTTC | 85 | 6.4774213E-9 | 26.469301 | 8 |
ATGCCGA | 90 | 1.1903467E-8 | 24.998785 | 22 |
CCGTCCT | 75 | 1.6970753E-6 | 23.998833 | 31 |
GAGACCG | 85 | 1.8927494E-7 | 23.82237 | 27 |
CGGAAGA | 115 | 6.717528E-9 | 21.53354 | 1 |
AAGAGCG | 105 | 6.086884E-8 | 21.433212 | 4 |
CCTTCGT | 75 | 4.5805493E-5 | 21.011513 | 1 |