Basic Statistics
Measure | Value |
---|---|
Filename | ERR1378274.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 746291 |
Sequences flagged as poor quality | 0 |
Sequence length | 51 |
%GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GCCGTGT | 45 | 0.0012267157 | 24.998028 | 10 |
CGTGAGC | 130 | 5.0931703E-11 | 22.511799 | 1 |
CTCGTAT | 50 | 0.0022640282 | 22.499731 | 42 |
AGACCGA | 60 | 0.006508855 | 18.749777 | 28 |
CCTTCGT | 105 | 3.096092E-5 | 17.151848 | 1 |
CGTATAA | 80 | 0.001710989 | 16.873669 | 10 |
GCCACCG | 135 | 8.573552E-7 | 16.66647 | 6 |
AGCGCTC | 85 | 0.0025642386 | 15.882163 | 7 |
TCGTTGG | 140 | 2.221106E-5 | 14.468962 | 4 |
CTTCGTT | 125 | 1.3740713E-4 | 14.406586 | 2 |
CTTCGTA | 95 | 0.0053741 | 14.210358 | 7 |
TGCCCGG | 95 | 0.0053764894 | 14.209405 | 13 |
CGCCACC | 180 | 1.1208977E-6 | 13.749836 | 5 |
TCGTATA | 100 | 0.007551698 | 13.498935 | 9 |
AGAGACG | 135 | 2.65026E-4 | 13.333176 | 40 |
GAGCCAC | 375 | 0.0 | 13.204267 | 4 |
TCGCTTG | 120 | 0.0016564444 | 13.123963 | 15 |
CGTTGGA | 155 | 5.805122E-5 | 13.064361 | 5 |
GAAACGG | 140 | 3.606216E-4 | 12.856129 | 10 |
TTCGTTG | 160 | 7.786456E-5 | 12.66119 | 3 |