Basic Statistics
Measure | Value |
---|---|
Filename | ERR1378271.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 1032706 |
Sequences flagged as poor quality | 0 |
Sequence length | 51 |
%GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AGACCGC | 70 | 8.1490725E-10 | 32.141994 | 28 |
TCGTATG | 70 | 8.1490725E-10 | 32.141994 | 43 |
CGTATGC | 80 | 3.3960532E-9 | 28.124243 | 44 |
CGCAATG | 80 | 3.3960532E-9 | 28.124243 | 32 |
GCGGTTC | 90 | 3.965397E-10 | 27.49926 | 8 |
CTCGTAT | 85 | 6.4810592E-9 | 26.469877 | 42 |
ACCGCAA | 85 | 6.4810592E-9 | 26.469877 | 30 |
CCGCAAT | 85 | 6.4810592E-9 | 26.469877 | 31 |
AGCGGTT | 105 | 2.3646862E-9 | 23.571936 | 7 |
GAGCGGT | 105 | 2.3646862E-9 | 23.571936 | 6 |
CGGTTCA | 110 | 4.0527084E-9 | 22.499395 | 9 |
GACCGCA | 100 | 3.644527E-8 | 22.499393 | 29 |
TCTCGTA | 100 | 3.644527E-8 | 22.499393 | 41 |
CCGAGAC | 115 | 6.7684596E-9 | 21.52116 | 25 |
GAGACCG | 105 | 6.1079845E-8 | 21.427996 | 27 |
AATGCCG | 130 | 1.2278178E-9 | 20.768673 | 21 |
ATGCCGA | 120 | 1.105218E-8 | 20.624445 | 22 |
AGAGCGG | 130 | 2.7706847E-8 | 19.038872 | 5 |
ATCTCGT | 120 | 2.4967449E-7 | 18.749496 | 40 |
AACGGGT | 60 | 0.0065110694 | 18.749496 | 12 |