Basic Statistics
Measure | Value |
---|---|
Filename | ERR1378270.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 988162 |
Sequences flagged as poor quality | 0 |
Sequence length | 51 |
%GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
ACCGGTT | 55 | 2.748493E-9 | 36.817684 | 30 |
CTCGTAT | 55 | 2.748493E-9 | 36.817684 | 42 |
CCGGTTG | 55 | 2.748493E-9 | 36.817684 | 31 |
GCGGTTC | 65 | 3.6743586E-10 | 34.614918 | 8 |
CGTATGC | 65 | 1.4033503E-8 | 31.153427 | 44 |
GACCGGT | 65 | 1.4033503E-8 | 31.153427 | 29 |
TCTCGTA | 65 | 1.4033503E-8 | 31.153427 | 41 |
AACGGGT | 30 | 0.005147252 | 29.999596 | 12 |
CGGTTGG | 70 | 2.8858267E-8 | 28.928183 | 32 |
GAGCGGT | 80 | 3.3924152E-9 | 28.126043 | 6 |
AGCGGTT | 80 | 3.3942342E-9 | 28.124622 | 7 |
AGACCGG | 80 | 1.0536132E-7 | 25.31216 | 28 |
CGCCCGG | 90 | 1.1907105E-8 | 24.999662 | 13 |
CCGAGAC | 85 | 1.8933315E-7 | 23.823208 | 25 |
AGAGCGG | 100 | 3.6416168E-8 | 22.500834 | 5 |
ACGCCCG | 60 | 2.4673942E-4 | 22.499697 | 12 |
ATGCCGA | 90 | 3.2864045E-7 | 22.499697 | 22 |
AAGAGCG | 105 | 6.099981E-8 | 21.430452 | 4 |
CGGTTCA | 105 | 6.106529E-8 | 21.428282 | 9 |
AATGCCG | 95 | 5.530819E-7 | 21.315502 | 21 |