Basic Statistics
Measure | Value |
---|---|
Filename | ERR1378264.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 948251 |
Sequences flagged as poor quality | 0 |
Sequence length | 51 |
%GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CTCGTAT | 45 | 1.9281288E-8 | 39.99911 | 42 |
GACCGGC | 30 | 0.0051473705 | 29.99933 | 12 |
TCTCGTA | 70 | 2.8856448E-8 | 28.927927 | 41 |
CGTATGC | 70 | 9.306459E-7 | 25.713713 | 44 |
AGACCGA | 70 | 9.306459E-7 | 25.713713 | 28 |
GACCGAC | 75 | 1.6974536E-6 | 23.999466 | 29 |
GCGGTTC | 80 | 2.9744187E-6 | 22.499498 | 8 |
CGACAGG | 80 | 2.9744187E-6 | 22.499498 | 32 |
TATCTCG | 80 | 2.9744187E-6 | 22.499498 | 39 |
CCGAGAC | 80 | 2.9744187E-6 | 22.499498 | 25 |
ACCGACA | 95 | 5.530801E-7 | 21.315313 | 30 |
AGCGGTT | 95 | 5.530801E-7 | 21.315313 | 7 |
CCGACAG | 90 | 8.250336E-6 | 19.999556 | 31 |
AAGAGCG | 95 | 1.3132969E-5 | 18.950943 | 4 |
GAGACCG | 95 | 1.31568795E-5 | 18.946945 | 27 |
TCGTATG | 95 | 1.31568795E-5 | 18.946945 | 43 |
GCGATCT | 85 | 1.2043644E-4 | 18.529 | 16 |
ATGCCGA | 110 | 2.2556123E-6 | 18.408682 | 22 |
CGGAAGA | 100 | 2.0408503E-5 | 18.005295 | 1 |
AATGCCG | 100 | 2.0464136E-5 | 17.9996 | 21 |