Basic Statistics
Measure | Value |
---|---|
Filename | ERR1378253.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 1151388 |
Sequences flagged as poor quality | 0 |
Sequence length | 51 |
%GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AATAGCG | 50 | 0.0022650445 | 22.49926 | 13 |
CTGCGTC | 60 | 0.0065101036 | 18.7502 | 42 |
ACGCCCG | 85 | 1.2047465E-4 | 18.528803 | 12 |
GCGGATC | 95 | 2.8200657E-4 | 16.578403 | 10 |
CGGATCA | 85 | 0.0025657306 | 15.881831 | 11 |
CGCCACT | 160 | 2.9640796E-7 | 15.468243 | 9 |
TGGGCGT | 90 | 0.0037460749 | 15.004722 | 1 |
AACCCGG | 165 | 4.2013562E-7 | 14.999508 | 22 |
AGCGCTC | 120 | 9.754902E-5 | 14.999508 | 7 |
GGCGGAT | 90 | 0.0037547448 | 14.999508 | 9 |
CCACGCC | 225 | 3.0559022E-10 | 14.999508 | 10 |
CGCCCGG | 135 | 1.5820466E-5 | 14.999508 | 13 |
GAAAGCG | 95 | 0.005372545 | 14.211911 | 4 |
CCGGCTA | 165 | 6.9117577E-6 | 13.635917 | 16 |
ACCACGC | 235 | 9.022187E-9 | 13.403816 | 9 |
CACGCCC | 170 | 9.405987E-6 | 13.234859 | 11 |
AAAGCGC | 190 | 2.0610714E-6 | 13.026455 | 5 |
GAACCCG | 175 | 1.2679067E-5 | 12.856721 | 21 |
ACCCGGG | 195 | 2.7594106E-6 | 12.691892 | 23 |
CGGCTAA | 160 | 7.824502E-5 | 12.655835 | 17 |