Basic Statistics
Measure | Value |
---|---|
Filename | ERR1378245.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 1516413 |
Sequences flagged as poor quality | 0 |
Sequence length | 51 |
%GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GCGTACA | 30 | 0.0051420555 | 30.006817 | 1 |
GTGCGAT | 90 | 8.259072E-6 | 19.998608 | 14 |
CGCGCCC | 85 | 1.20540615E-4 | 18.528122 | 11 |
TCACGAA | 80 | 0.0017112271 | 16.874939 | 34 |
CCACCGC | 190 | 4.4929038E-10 | 16.578888 | 7 |
AATTTCG | 85 | 0.0025657343 | 15.882295 | 37 |
GTGCGCC | 90 | 0.0037489876 | 15.003408 | 2 |
CGCCACC | 310 | 0.0 | 14.517511 | 5 |
GGTGCGA | 95 | 0.005379543 | 14.2095375 | 13 |
CCTTCGT | 195 | 1.825083E-7 | 13.849299 | 1 |
GCCACCG | 260 | 1.8007995E-10 | 13.847473 | 6 |
CACCGCG | 130 | 1.9273657E-4 | 13.845646 | 8 |
ACCGCGC | 130 | 1.927905E-4 | 13.845191 | 9 |
CGCCCGG | 245 | 1.0968506E-9 | 13.774551 | 13 |
GCGCCCG | 185 | 1.529761E-6 | 13.377447 | 12 |
ACGCCCG | 125 | 0.0022532702 | 12.599122 | 12 |
TGCGCCA | 145 | 4.8421777E-4 | 12.416204 | 3 |
GCCCGGC | 375 | 3.6379788E-12 | 11.999166 | 14 |
AAAGCGC | 195 | 3.841639E-5 | 11.53956 | 5 |
CGTGAGC | 295 | 1.731496E-8 | 11.443277 | 1 |