Basic Statistics
Measure | Value |
---|---|
Filename | ERR1378182.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 1128424 |
Sequences flagged as poor quality | 0 |
Sequence length | 51 |
%GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CGTATGC | 105 | 0.0 | 40.711117 | 44 |
GCGGGTT | 25 | 0.0021001152 | 36.024334 | 1 |
TCTCGTA | 140 | 0.0 | 33.747375 | 41 |
TCGTATG | 130 | 0.0 | 32.882057 | 43 |
CTCGTAT | 140 | 0.0 | 30.533339 | 42 |
AGACCGA | 140 | 0.0 | 30.533339 | 28 |
ATCTCGT | 170 | 0.0 | 29.117964 | 40 |
AGAGCGG | 165 | 0.0 | 28.64556 | 5 |
GACCGAG | 155 | 0.0 | 27.5785 | 29 |
ACCGAGA | 165 | 0.0 | 27.270605 | 30 |
GAGACCG | 160 | 0.0 | 25.31053 | 27 |
GAGCGGT | 180 | 0.0 | 25.008028 | 6 |
ATGCCGA | 205 | 0.0 | 24.144463 | 22 |
AAGAGCG | 195 | 0.0 | 23.084335 | 4 |
GCGGTTC | 195 | 0.0 | 23.07513 | 8 |
GATCGGA | 50 | 0.0022656086 | 22.49825 | 18 |
AGCGGTT | 200 | 0.0 | 22.49825 | 7 |
AATGCCG | 205 | 0.0 | 21.949512 | 21 |
TGCCGAG | 205 | 0.0 | 21.949512 | 23 |
CGGTTCA | 215 | 0.0 | 20.928604 | 9 |