Basic Statistics
Measure | Value |
---|---|
Filename | ERR1378147.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 866711 |
Sequences flagged as poor quality | 0 |
Sequence length | 51 |
%GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AGACCGT | 80 | 0.0 | 36.561096 | 28 |
GACCGTG | 85 | 0.0 | 34.410442 | 29 |
ATCTCGT | 90 | 0.0 | 32.500626 | 40 |
CGTATGC | 90 | 0.0 | 32.500626 | 44 |
AGATCGG | 50 | 1.9814706E-6 | 31.498787 | 17 |
CCGTGTA | 95 | 0.0 | 30.788288 | 31 |
CTCGTAT | 90 | 1.2732926E-11 | 30.000576 | 42 |
TCTCGTA | 90 | 1.2732926E-11 | 30.000576 | 41 |
ACATCGG | 30 | 0.005147537 | 29.998846 | 21 |
GAGACCG | 105 | 3.6379788E-12 | 27.856071 | 27 |
TCGTATG | 105 | 3.6379788E-12 | 27.856071 | 43 |
GCGGTTC | 110 | 5.456968E-12 | 26.589886 | 8 |
GATCGGA | 60 | 8.190957E-6 | 26.24899 | 18 |
CGTGTAT | 115 | 9.094947E-12 | 25.433805 | 32 |
CATCTCG | 125 | 2.910383E-11 | 23.400452 | 39 |
AGCGGTT | 125 | 2.910383E-11 | 23.3991 | 7 |
CCGAGAC | 125 | 2.910383E-11 | 23.3991 | 25 |
ACCGTGT | 125 | 2.910383E-11 | 23.3991 | 30 |
AGAGCGG | 135 | 8.367351E-11 | 21.669584 | 5 |
GTATGCC | 135 | 8.367351E-11 | 21.667084 | 45 |