ERR1390671.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1390671.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	597151
Sequences flagged as poor quality	0
Sequence length	51
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

No overrepresented sequences

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GACCGTT	30	1.1412263E-4	37.48904	29
TCTCGTA	30	1.1412263E-4	37.48904	41
CCGTTAC	40	1.5624379E-5	33.74014	31
CTCGTAT	35	2.8236015E-4	32.13347	42
CGTTACA	35	2.8236015E-4	32.13347	32
ACCGTTA	45	3.4950273E-5	29.991236	30
ATCTCGT	40	6.1731855E-4	28.116783	40
CGTATGC	40	6.1731855E-4	28.116783	44
AGACCGT	45	0.001227954	24.992697	28
AGGGCGG	45	0.001227954	24.992697	32
AGATCGG	55	1.369841E-4	24.538284	17
TCGGAAG	55	1.369841E-4	24.538284	20
TCGTATG	55	1.369841E-4	24.538284	43
CCTTCGT	110	3.95994E-9	22.540611	1
AACGGGT	60	2.470464E-4	22.493425	12
ATCGGAA	60	2.470464E-4	22.493425	19
GATCGGA	65	4.2433047E-4	20.763165	18
GAGACCG	55	0.0039410195	20.44857	27
TCGTTGG	165	5.820766E-11	19.125366	4
CATCTCG	60	0.006517904	18.74452	39