FastQCFastQC Report
Mon 6 Jun 2016
ERR1390599.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR1390599.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences267881
Sequences flagged as poor quality0
Sequence length51
%GC41

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATCTCG207.0235884E-445.039
CGTCATG301.1375852E-437.49999632
TCGTATG301.1388365E-437.49343
ACCGTCA250.002104230236.030
CGTATGC250.002106159735.99328244
CTCGTAT250.002106159735.99328242
AGACCGT250.002106159735.99328228
AGAGCGG300.005130911730.0112085
GACCGTC300.005140293429.99999829
CCGTCAT300.005140293429.99999831
CCGAGAC300.005140293429.99999825
GAGCGGT300.00514498929.99446
TCTCGTA300.00514498929.994441
CGAGACC450.001224098725.00000226
GCTGGTC1351.572573E-515.00000122
GTCATGT950.005361783314.21052633
ACTAGAC1301.9174581E-413.84615319
GCTCCAA1000.007466268313.5176661
GCAACAA1000.00753116713.530
CTAGACA2104.4631815E-712.85714220
Produced by FastQC (version 0.11.5)