ERR1379376.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1379376.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	710524
Sequences flagged as poor quality	0
Sequence length	51
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGGAAGAGCGGTTCAGCAGGAATGCCGAGACCGAGTGCAATCTCGTATGCC	1847	0.2599489953893183	Illumina Paired End PCR Primer 2 (97% over 34bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGGAAGA	270	39.174385	1
GAGCGGT	275	38.45671	6
CGTATGC	275	38.454006	44
TCGTATG	275	38.454006	43
GCGGTTC	285	37.894203	8
ACCGAGT	275	37.635834	30
GAGACCG	285	37.10474	27
AGAGCGG	290	36.46757	5
CGGTTCA	290	36.465004	9
GACCGAG	295	35.846954	29
AGCGGTT	295	35.846954	7
TCTCGTA	295	35.846954	41
CTCGTAT	300	35.249504	42
AGACCGA	300	35.249504	28
CGAGTGC	300	33.749527	32
CCGAGAC	315	33.570957	25
CCGAGTG	310	33.386627	31
AAGAGCG	325	33.23264	4
ATCTCGT	320	33.046413	40
AATGCCG	320	33.046413	21