ERR1379367.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1379367.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	691319
Sequences flagged as poor quality	0
Sequence length	51
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGGAAGAGCGGTTCAGCAGGAATGCCGAGACCGGACTAGATCTCGTATGCC	1877	0.2715099686251933	Illumina Paired End PCR Primer 2 (96% over 33bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGGACTA	220	42.953995	32
CTCGTAT	225	42.002495	42
TCTCGTA	225	42.002495	41
CGTATGC	225	41.99946	44
TCGTATG	230	41.086426	43
ACCGGAC	230	40.108177	30
CCGGACT	235	39.254818	31
GACCGGA	240	38.437004	29
AGACCGG	245	37.65258	28
ATCTCGT	255	37.061028	40
CCGAGAC	255	36.176006	25
GGACTAG	265	34.810875	33
GAGACCG	265	34.810875	27
GAGCGGT	275	34.363194	6
CGGTTCA	285	33.157467	9
GCGGTTC	290	32.58579	8
AAGAGCG	290	32.58579	4
GTATGCC	285	32.368004	45
AGCGGTT	295	32.03349	7
ACTAGAT	305	31.720905	35