ERR1379313.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1379313.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	342224
Sequences flagged as poor quality	0
Sequence length	51
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

No overrepresented sequences

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACCGGGA	35	6.235574E-6	38.571304	30
CTCGTAT	35	6.235574E-6	38.571304	42
AGCGGTT	35	6.235574E-6	38.571304	7
ATGCCGA	35	6.235574E-6	38.571304	22
TATCTCG	40	1.5574125E-5	33.749893	39
GAGCGGT	40	1.5574125E-5	33.749893	6
TCTCGTA	40	1.5574125E-5	33.749893	41
CGTATGC	45	3.483836E-5	29.9999	44
CGGTTCA	45	3.483836E-5	29.9999	9
AATGCCG	45	3.483836E-5	29.9999	21
AGACCGG	45	3.483836E-5	29.9999	28
CCGAGAC	45	3.483836E-5	29.9999	25
TCGTATG	45	3.483836E-5	29.9999	43
TGCCGAG	45	3.483836E-5	29.9999	23
GTATGCC	65	4.8567017E-7	27.692219	45
GCGGTTC	50	7.144123E-5	26.999912	8
CGGGAGT	50	7.144123E-5	26.999912	32
AGAGCGG	50	7.144123E-5	26.999912	5
GACCGGG	60	8.169802E-6	26.249914	29
GAGACCG	55	1.3654918E-4	24.545376	27