ERR1379306.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1379306.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	473893
Sequences flagged as poor quality	0
Sequence length	51
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

No overrepresented sequences

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GACCGGT	40	6.8012014E-9	44.999687	29
TCTCGTA	45	1.9243089E-8	39.999718	41
ACCGGTA	50	4.868889E-8	35.999744	30
GCGGTTC	50	4.868889E-8	35.999744	8
GAGACCG	50	4.868889E-8	35.999744	27
CGTATGC	55	1.12540874E-7	32.727043	44
AGCGGTT	55	1.12540874E-7	32.727043	7
GAGCGGT	55	1.12540874E-7	32.727043	6
AGACCGG	55	1.12540874E-7	32.727043	28
TCGTATG	55	1.12540874E-7	32.727043	43
CCGGTAT	60	2.4140536E-7	29.999786	31
CTCGTAT	65	4.863505E-7	27.692112	42
AAGAGCG	65	4.863505E-7	27.692112	4
CGGTATG	65	4.863505E-7	27.692112	32
ATGCCGA	65	4.863505E-7	27.692112	22
AGAGCGG	65	4.863505E-7	27.692112	5
TGCCGAG	65	4.863505E-7	27.692112	23
ATCTCGT	70	9.2887785E-7	25.714106	40
CGGTTCA	80	2.9688163E-6	22.499844	9
AATGCCG	80	2.9688163E-6	22.499844	21