ERR1379293.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1379293.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	479267
Sequences flagged as poor quality	0
Sequence length	51
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

No overrepresented sequences

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCGGTTC	45	1.9246727E-8	39.999165	8
CGGTTCA	45	1.9246727E-8	39.999165	9
GAGCGGT	45	1.9246727E-8	39.999165	6
ACCGGGT	50	4.8696165E-8	35.99925	30
GACCGGG	50	4.8696165E-8	35.99925	29
AGCGGTT	50	4.8696165E-8	35.99925	7
CTCGTAT	45	8.687275E-7	34.999268	42
GCGCTCC	45	8.687275E-7	34.999268	8
CGGGTAG	55	1.12559064E-7	32.72659	32
ATCTCGT	55	1.12559064E-7	32.72659	40
TCTCGTA	55	1.12559064E-7	32.72659	41
CCGAGAC	55	1.12559064E-7	32.72659	25
ATGCCGA	55	1.12559064E-7	32.72659	22
TATCTCG	50	1.9787549E-6	31.499342	39
AAGAGCG	60	2.4122346E-7	30.002502	4
CCGGGTA	60	2.4144356E-7	29.999374	31
GAGACCG	60	2.4144356E-7	29.999374	27
AGACCGG	60	2.4144356E-7	29.999374	28
AGAGCGG	60	2.4144356E-7	29.999374	5
TGCCGAG	65	4.864287E-7	27.691729	23