ERR1379281.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1379281.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	503474
Sequences flagged as poor quality	0
Sequence length	51
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

No overrepresented sequences

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTTAGA	20	7.0168247E-4	45.01649	1
AGCGGTT	55	6.002665E-11	40.907825	7
GAGACCG	50	1.0786607E-9	40.49875	27
GCGGTTC	60	1.546141E-10	37.49884	8
GACCGTT	55	2.743036E-9	36.817043	29
CCGAGAC	55	2.743036E-9	36.817043	25
AATGCCG	50	4.87089E-8	35.998886	21
ATGCCGA	50	4.87089E-8	35.998886	22
CGTATGC	60	6.4192136E-9	33.74896	44
GAGCGGT	60	6.4192136E-9	33.74896	6
AGACCGT	60	6.4192136E-9	33.74896	28
ACCGTTG	60	6.4192136E-9	33.74896	30
TCTCGTA	65	1.4006218E-8	31.152884	41
TCGTATG	65	1.4006218E-8	31.152884	43
AAGAGCG	70	2.8720024E-8	28.936298	4
AGAGCGG	70	2.8774593E-8	28.93055	5
ATCTCGT	70	2.8803697E-8	28.927677	40
CTCGTAT	70	2.8803697E-8	28.927677	42
CCGTTGG	70	2.8803697E-8	28.927677	31
CGGTTCA	80	1.0516487E-7	25.311718	9