ERR1379277.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1379277.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	482609
Sequences flagged as poor quality	0
Sequence length	51
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

No overrepresented sequences

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGCGGTT	30	1.1390023E-4	37.499653	7
CGGAAGA	35	2.8146963E-4	32.149223	1
CTCGTAT	35	2.8181216E-4	32.14256	42
GACCGCA	35	2.8181216E-4	32.14256	29
AATGCCG	35	2.8181216E-4	32.14256	21
CGGTTCA	40	6.16125E-4	28.124743	9
TCTCGTA	40	6.16125E-4	28.124743	41
AGACCGC	40	6.16125E-4	28.124743	28
TCGTATG	40	6.16125E-4	28.124743	43
ATCTCGT	45	0.0012255895	24.99977	40
GCGGTTC	45	0.0012255895	24.99977	8
GAGCGGT	45	0.0012255895	24.99977	6
CCGAGAC	45	0.0012255895	24.99977	25
CCGCAAG	45	0.0012255895	24.99977	31
AGAGCGG	45	0.0012255895	24.99977	5
TGCCGAG	55	1.3666824E-4	24.545229	23
CGTATGC	50	0.0022628417	22.499794	44
CGCAAGA	50	0.0022628417	22.499794	32
ACCGCAA	65	4.2335867E-4	20.76904	30
ATGCCGA	55	0.0039334903	20.454357	22