ERR1379210.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1379210.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	445110
Sequences flagged as poor quality	0
Sequence length	51
%GC	39

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGGAAGAGCGGTTCAGCAGGAATGCCGAGACCGGTTGTTATCTCGTATGCC	1282	0.28801869200871694	Illumina Paired End PCR Primer 2 (97% over 35bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GACCGGT	145	43.444805	29
AGAGCGG	145	41.912037	5
ATCTCGT	145	41.893208	40
CGTATGC	145	41.893208	44
TATCTCG	145	41.893208	39
TCGTATG	145	41.893208	43
ACCGGTT	140	41.782375	30
GCGGTTC	150	40.510414	8
CGGTTGT	145	40.341606	32
GAGCGGT	155	39.20363	6
GAGACCG	155	39.19042	27
TCTCGTA	155	39.19042	41
AGACCGG	155	39.19042	28
CGGAAGA	150	39.014416	1
CGGTTCA	160	37.96572	9
CCGGTTG	155	37.738922	31
GTATGCC	175	37.282734	45
AAGAGCG	165	36.835934	4
AGCGGTT	165	36.827652	7
CTCGTAT	165	36.815243	42