ERR1379196.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1379196.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	368182
Sequences flagged as poor quality	0
Sequence length	51
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGGAAGAGCGGTTCAGCAGGAATGCCGAGACCGCGTATTATCTCGTATGCC	996	0.2705183849291926	Illumina Paired End PCR Primer 2 (96% over 33bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCTCGTA	165	43.633995	41
CCGCGTA	165	43.633995	31
CGCGTAT	165	43.633995	32
CGTATTA	170	42.35064	34
CGTATGC	170	42.35064	44
CTCGTAT	170	42.35064	42
TATCTCG	170	42.35064	39
GCGTATT	170	42.35064	33
ACCGCGT	165	42.27043	30
ATCTCGT	180	39.997826	40
TCGTATG	180	39.997826	43
GCGGTTC	185	38.922092	8
GACCGCG	180	38.747894	29
GAGACCG	180	38.747894	27
CGGAAGA	170	38.395912	1
AGAGCGG	190	37.902973	5
GAGCGGT	190	37.897827	6
AGACCGC	185	37.700657	28
CGGTTCA	200	37.122982	9
GTATGCC	195	36.92107	45