ERR1379190.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1379190.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	459314
Sequences flagged as poor quality	0
Sequence length	51
%GC	39

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGGAAGAGCGGTTCAGCAGGAATGCCGAGACCGGTCATTATCTCGTATGCC	904	0.19681525056932733	Illumina Paired End PCR Primer 2 (97% over 36bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCGTATG	95	42.630238	43
ACCGGTC	90	42.498665	30
GACCGGT	90	42.498665	29
CTCGTAT	95	40.261894	42
GCGGTTC	95	40.261894	8
AGCGGTT	95	40.261894	7
AGAGCGG	100	38.252964	5
CGTATGC	100	38.2488	44
CGGTTCA	100	38.2488	9
TATCTCG	100	38.2488	39
CCGAGAC	110	36.817024	25
CCGGTCA	110	36.817024	31
CGGTCAT	110	36.817024	32
ATCTCGT	105	36.427425	40
GAGACCG	105	36.427425	27
GAGCGGT	105	36.427425	6
AGACCGG	105	36.427425	28
AAGAGCG	110	34.782993	4
TCTCGTA	110	34.771633	41
CGGAAGA	115	33.270687	1