ERR1379175.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1379175.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	254824
Sequences flagged as poor quality	0
Sequence length	51
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGGAAGAGCGGTTCAGCAGGAATGCCGAGACCGTAACCTATCTCGTATGCC	1048	0.41126424512604776	Illumina Paired End PCR Primer 2 (96% over 33bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GAGACCG	160	43.59166	27
AGACCGT	160	43.59166	28
CGTAACC	160	43.59166	32
CTCGTAT	165	42.270702	42
GACCGTA	165	42.270702	29
TATCTCG	165	42.270702	39
ACCGTAA	165	42.270702	30
ATCTCGT	170	41.027443	40
CGTATGC	170	41.027443	44
CCGTAAC	170	41.027443	31
TCTCGTA	170	41.027443	41
GTATGCC	175	39.85523	45
GCGGTTC	185	38.917053	8
AATGCCG	180	38.748142	21
ATGCCGA	180	38.748142	22
TGCCGAG	180	38.748142	23
CCGAGAC	175	38.569576	25
AAGAGCG	190	37.907795	4
AGAGCGG	190	37.907795	5
GAGCGGT	190	37.900356	6